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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9621566 chr22:33187010 C/T TOMM22 chr22:39077953-39081426:+ -0.6 -6.98 1.01E-11 Box Plot
THCA rs9621566 chr22:33187010 C/T TRABD chr22:50624344-50638027:+ -0.49 -6.11 2.13E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T TRMT2A chr22:20099389-20104915:- -0.48 -6.23 1.04E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T TRMU chr22:46726772-46753237:+ -0.5 -7.47 3.79E-13 Box Plot
THCA rs9621566 chr22:33187010 C/T TUBGCP6 chr22:50656118-50683421:- -0.41 -6 3.89E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T TUG1 chr22:31366663-31375381:+ -0.58 -6.97 1.09E-11 Box Plot
THCA rs9621566 chr22:33187010 C/T TXN2 chr22:36863083-36878077:- -0.6 -7.78 4.48E-14 Box Plot
THCA rs9621566 chr22:33187010 C/T UFD1L chr22:19437433-19466738:- -0.54 -6.44 2.96E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T UQCR10 chr22:30163358-30166402:+ -0.41 -6.43 3.07E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T XRCC6 chr22:42017123-42060052:+ -0.62 -7.36 7.83E-13 Box Plot
THCA rs9621566 chr22:33187010 C/T ZMAT5 chr22:30126945-30163000:- -0.47 -7.12 4.02E-12 Box Plot
THCA rs9621566 chr22:33187010 C/T ZNF70 chr22:24080865-24093279:- -0.56 -6.31 6.39E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G ACO2 chr22:41865129-41924993:+ 0.49 7.08 5.3E-12 Box Plot
THCA rs9621609 chr22:33347552 A/G ADRBK2 chr22:25960816-26125261:+ 0.54 5.99 4.03E-9 Box Plot
THCA rs9621609 chr22:33347552 A/G ADSL chr22:40742504-40786467:+ 0.61 8.14 3.47E-15 Box Plot